EnhancerDB
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  3. rs556870546[chr17:43409058]
Enhancers that have rs556870546[chr17:43409058]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43404711 43426395 enh17187
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Uterus Thymus Heart
Transcript factors that have rs556870546[chr17:43409058]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43408760 43409074 TCF7L2 GTRD no Colon (HCT116) 21765276
chr17 43409051 43409064 SMAD2 JASPAR yes 54445591
chr17 43409056 43409064 TBX15 JASPAR yes 54445592
chr17 43409056 43409064 TBX4 JASPAR yes 54445593
chr17 43409056 43409065 ZEB1 JASPAR yes 54445594
chr17 43409057 43409067 ID4 JASPAR yes 54445595
chr17 43409057 43409067 NHLH1 JASPAR yes 54445596
chr17 43409057 43409067 TCF3 JASPAR yes 54445597
chr17 43409057 43409067 TCF4 JASPAR yes 54445598
chr17 43409058 43409067 SNAI2 JASPAR yes 54445599
Genes associated with rs556870546[chr17:43409058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More