EnhancerDB
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  3. rs556893972[chr2:235200781]
Enhancers that have rs556893972[chr2:235200781]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235192981 235207115 enh6214
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1)
chr2 235200452 235200981 vista35249
VISTA
Transcript factors that have rs556893972[chr2:235200781]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235200779 235200783 LFA1 TRANSFAC yes 22233691
chr2 235200779 235200783 LFA1 TRANSFAC yes 81863150
Genes associated with rs556893972[chr2:235200781], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More