EnhancerDB
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  3. rs55689606[chr1:9385297]
Enhancers that have rs55689606[chr1:9385297]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9371725 9388955 enh11483
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Pancreas (Panc1) Uterus Stomach
Transcript factors that have rs55689606[chr1:9385297]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9385277 9385297 RREB1 JASPAR yes 26638370
chr1 9385278 9385298 RREB1 JASPAR yes 26638371
chr1 9385279 9385299 RREB1 JASPAR yes 26638372
chr1 9385281 9385301 RREB1 JASPAR yes 26638375
chr1 9385281 9385302 ZNF263 JASPAR yes 26638376
chr1 9385283 9385303 RREB1 JASPAR yes 26638380
chr1 9385285 9385306 ZNF263 JASPAR yes 26638385
chr1 9385286 9385307 ZNF263 JASPAR yes 26638388
chr1 9385287 9385297 SP1 JASPAR yes 26638389
chr1 9385287 9385297 ZNF740 JASPAR yes 26638390
chr1 9385287 9385307 RREB1 JASPAR yes 26638391
chr1 9385288 9385298 ZNF740 JASPAR yes 26638392
chr1 9385289 9385299 SP1 JASPAR yes 26638393
chr1 9385289 9385300 E2F4 JASPAR yes 26638394
chr1 9385289 9385310 ZNF263 JASPAR yes 26638395
chr1 9385291 9385300 SP1 TRANSFAC yes 26638396
chr1 9385292 9385298 SP1 TRANSFAC yes 26638397
chr1 9385292 9385302 SP1 JASPAR yes 26638398
chr1 9385293 9385300 SP1 TRANSFAC yes 26638399
chr1 9385294 9385299 SP1 TRANSFAC yes 26638400
chr1 9385294 9385300 SP1 TRANSFAC yes 26638401
chr1 9385297 9385303 SP1 TRANSFAC yes 26638402
chr1 9385297 9385307 SP1 JASPAR yes 26638403
Genes associated with rs55689606[chr1:9385297], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More