EnhancerDB
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  3. rs556897583[chr12:92952959]
Enhancers that have rs556897583[chr12:92952959]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 92931041 92959835 enh14884
Liver Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr12 92952576 92953022 vista14428
VISTA
Transcript factors that have rs556897583[chr12:92952959]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 92952385 92953045 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21562778
chr12 92952385 92953045 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108050396
chr12 92952643 92953053 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108050397
chr12 92952770 92953150 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21562779
chr12 92952770 92953150 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108050398
chr12 92952856 92953169 TCF7L2 GTRD no Colon (HCT116) 108050399
chr12 92952956 92952960 H1TF2 TRANSFAC yes 82454158
chr12 92952956 92952960 NFE TRANSFAC yes 82454159
chr12 92952956 92952960 SRF TRANSFAC yes 82454160
chr12 92952956 92952960 H1TF2 TRANSFAC yes 122782166
chr12 92952956 92952960 NFE TRANSFAC yes 122782167
chr12 92952956 92952960 SRF TRANSFAC yes 122782168
Genes associated with rs556897583[chr12:92952959], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More