EnhancerDB
  1. Home
  2. SNP
  3. rs556900340[chr16:88366342]
Enhancers that have rs556900340[chr16:88366342]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88359920 88374013 enh32028
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs556900340[chr16:88366342]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88365601 88366379 EP300 UCSC Txn Factor no Conserved 108221975
chr16 88365601 88366379 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221976
chr16 88365776 88366432 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108222013
chr16 88365779 88366420 TFAP2C UCSC Txn Factor no Conserved 108222016
chr16 88365882 88366366 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108222029
chr16 88365904 88366420 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736064
chr16 88365904 88366420 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108222030
chr16 88366021 88366597 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736065
chr16 88366021 88366597 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108222031
chr16 88366023 88366451 ZNF274 GTRD no Liver (HepG2) 108222032
chr16 88366029 88367208 ZNF274 GTRD no Bone Marrow (K562) 21736066
chr16 88366029 88367208 ZNF274 GTRD no Bone Marrow (K562) 108222033
chr16 88366029 88367208 ZNF274 GTRD no Bone Marrow (K562) 108222034
chr16 88366071 88366478 YY1 GTRD no Embryonic Stem Cell Line (H1-hESC) 108222035
chr16 88366224 88366935 ZNF274 GTRD no Bone Marrow (K562) 21736067
chr16 88366224 88366935 ZNF274 GTRD no Bone Marrow (K562) 108222036
chr16 88366271 88367093 ZNF274 GTRD no Bone Marrow (K562) 21736068
chr16 88366271 88367093 ZNF274 GTRD no Bone Marrow (K562) 108222037
chr16 88366329 88366344 STAT1 JASPAR yes 12279693
chr16 88366331 88366342 STAT3 JASPAR yes 12279694
chr16 88366333 88366872 ZNF274 GTRD no Bone Marrow (K562) 21736069
chr16 88366333 88366872 ZNF274 GTRD no Bone Marrow (K562) 108222038
Genes associated with rs556900340[chr16:88366342], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More