EnhancerDB
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  3. rs55690610[chr17:79964087]
Enhancers that have rs55690610[chr17:79964087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79955085 79966579 enh17449
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs55690610[chr17:79964087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79964082 79964091 SNAI2 JASPAR yes 56345934
chr17 79964082 79964092 FIGLA JASPAR yes 56345935
chr17 79964082 79964092 ID4 JASPAR yes 56345936
chr17 79964082 79964092 TCF3 JASPAR yes 56345937
chr17 79964082 79964092 TCF4 JASPAR yes 56345938
chr17 79964084 79964093 ZEB1 JASPAR yes 56345939
chr17 79964085 79964093 TBX5 JASPAR yes 56345940
chr17 79964086 79964106 RREB1 JASPAR yes 56345941
Genes associated with rs55690610[chr17:79964087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More