EnhancerDB
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  3. rs556954632[chr19:4568896]
Enhancers that have rs556954632[chr19:4568896]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4562990 4590495 enh17872
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Lung Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Spleen Uterus Stomach
Transcript factors that have rs556954632[chr19:4568896]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4566417 4569437 TCF7L2 GTRD no Colon (HCT116) 21841499
chr19 4566417 4569437 TCF7L2 GTRD no Colon (HCT116) 108372159
chr19 4566417 4569437 TCF7L2 GTRD no Colon (HCT116) 108372160
chr19 4566417 4569437 TCF7L2 GTRD no Colon (HCT116) 108372161
chr19 4568399 4569157 ZNF274 GTRD no Bone Marrow (K562) 108372333
chr19 4568651 4569046 ZBTB33 GTRD no Lung (A549) 108372334
chr19 4568690 4569084 ZNF274 GTRD no Bone Marrow (K562) 108372335
chr19 4568811 4569019 ZNF274 GTRD no Liver (HepG2) 21841539
chr19 4568811 4569019 ZNF274 GTRD no Liver (HepG2) 108372336
chr19 4568858 4569308 ZNF274 GTRD no Blood (GM12878) 108372337
chr19 4568888 4568899 CEBPB JASPAR yes 112174377
chr19 4568888 4568900 HLF JASPAR yes 112174378
chr19 4568889 4568899 CEBPB JASPAR yes 112174379
chr19 4568889 4568899 CEBPD JASPAR yes 112174380
chr19 4568889 4568899 CEBPE JASPAR yes 112174381
chr19 4568889 4568899 CEBPG JASPAR yes 112174382
chr19 4568889 4568900 CEBPA JASPAR yes 112174383
chr19 4568892 4568911 RFX2 JASPAR yes 112174384
chr19 4568896 4568912 RFX2 JASPAR yes 112174385
chr19 4568896 4568912 RFX3 JASPAR yes 112174386
chr19 4568896 4568912 RFX4 JASPAR yes 112174387
chr19 4568896 4568912 RFX5 JASPAR yes 112174388
Genes associated with rs556954632[chr19:4568896], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More