EnhancerDB
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  3. rs556959771[chr6:41685923]
Enhancers that have rs556959771[chr6:41685923]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556959771[chr6:41685923]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41685911 41685931 RREB1 JASPAR yes 101668787
chr6 41685916 41685936 RREB1 JASPAR yes 101668788
chr6 41685918 41685933 FOXP1 JASPAR yes 101668789
chr6 41685919 41685939 RREB1 JASPAR yes 101668790
Genes associated with rs556959771[chr6:41685923], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More