EnhancerDB
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  3. rs556999740[chr1:15501844]
Enhancers that have rs556999740[chr1:15501844]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15498831 15536635 enh11531
Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs556999740[chr1:15501844]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15501828 15501845 ESR1 JASPAR yes 26966801
chr1 15501830 15501849 PAX5 JASPAR yes 26966802
chr1 15501833 15501850 PAX9 JASPAR yes 26966803
Genes associated with rs556999740[chr1:15501844], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More