EnhancerDB
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  3. rs55709348[chr1:118203680]
Enhancers that have rs55709348[chr1:118203680]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 118194385 118210705 enh589
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Thymus Epithelial (MCF-7)
chr1 118203607 118204114 vista3106
VISTA
Transcript factors that have rs55709348[chr1:118203680]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 118203663 118204033 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334712
chr1 118203663 118204033 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825409
chr1 118203679 118203692 NFKB1 JASPAR yes 31890606
chr1 118203679 118203692 NFKB2 JASPAR yes 31890607
chr1 118203679 118203692 NFKB1 JASPAR yes 118358818
chr1 118203679 118203692 NFKB2 JASPAR yes 118358819
Genes associated with rs55709348[chr1:118203680], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More