EnhancerDB
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  3. rs557099341[chr6:42008178]
Enhancers that have rs557099341[chr6:42008178]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42004605 42015829 enh9109
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs557099341[chr6:42008178]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42008163 42008183 RREB1 JASPAR yes 101689056
chr6 42008166 42008186 RREB1 JASPAR yes 101689057
chr6 42008174 42008189 FOXP1 JASPAR yes 101689058
chr6 42008174 42008195 IRF1 JASPAR yes 101689059
chr6 42008178 42008193 PRDM1 JASPAR yes 101689060
Genes associated with rs557099341[chr6:42008178], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More