EnhancerDB
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  3. rs557126890[chr12:65196931]
Enhancers that have rs557126890[chr12:65196931]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65181625 65209755 enh14785
Prostate (PC-3) Brain (SK-N-MC) Large Intestine Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs557126890[chr12:65196931]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65196924 65196937 SMAD2 JASPAR yes 121431384
chr12 65196929 65196944 SCRT1 JASPAR yes 121431385
chr12 65196930 65196940 FIGLA JASPAR yes 121431386
chr12 65196930 65196940 ID4 JASPAR yes 121431387
chr12 65196930 65196940 MSC JASPAR yes 121431388
chr12 65196930 65196940 MYF6 JASPAR yes 121431389
chr12 65196930 65196940 TCF3 JASPAR yes 121431390
chr12 65196930 65196940 TCF4 JASPAR yes 121431391
chr12 65196931 65196940 SNAI2 JASPAR yes 121431392
chr12 65196931 65196944 SCRT2 JASPAR yes 121431393
Genes associated with rs557126890[chr12:65196931], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More