EnhancerDB
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  3. rs55713449[chr12:50220152]
Enhancers that have rs55713449[chr12:50220152]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50211669 50221520 enh2337
Skin (Keratinocyte) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Blood (Karpas-422) Thymus Heart
Transcript factors that have rs55713449[chr12:50220152]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50219185 50223106 ZNF274 GTRD no Blood (GM12878) 21544867
chr12 50219185 50223106 ZNF274 GTRD no Blood (GM12878) 108030841
chr12 50219191 50225080 ZNF274 GTRD no Blood (GM12878) 21544868
chr12 50219191 50225080 ZNF274 GTRD no Blood (GM12878) 108030842
chr12 50219507 50223055 ZNF274 GTRD no Cervix (HeLa-S3) 108030843
chr12 50219557 50223169 ZNF274 GTRD no Blood (GM12878) 21544869
chr12 50219557 50223169 ZNF274 GTRD no Blood (GM12878) 108030844
chr12 50219867 50221090 P63 GTRD no Skin (Keratinocyte) 21544870
chr12 50219867 50221090 P63 GTRD no Skin (Keratinocyte) 108030845
chr12 50219960 50221091 P63 GTRD no Skin (Keratinocyte) 21544871
chr12 50219960 50221091 P63 GTRD no Skin (Keratinocyte) 108030846
chr12 50219960 50221143 P63 GTRD no Skin (Keratinocyte) 21544872
chr12 50219960 50221143 P63 GTRD no Skin (Keratinocyte) 108030847
chr12 50220008 50221122 P63 GTRD no Skin (Keratinocyte) 21544873
chr12 50220008 50221122 P63 GTRD no Skin (Keratinocyte) 108030848
chr12 50220077 50223385 ZNF274 GTRD no Bone Marrow (K562) 108030849
chr12 50220141 50223090 ZNF274 GTRD no Blood (GM12878) 21544874
chr12 50220141 50223090 ZNF274 GTRD no Blood (GM12878) 108030850
Genes associated with rs55713449[chr12:50220152], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 49962001 50038449 + PRPF40B ENSG00000110844.9 49962001 181703 Ovary 0.399355 12033