EnhancerDB
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  3. rs557173559[chr1:228972281]
Enhancers that have rs557173559[chr1:228972281]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs557173559[chr1:228972281]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228972131 228972447 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388845
chr1 228972131 228972447 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877480
chr1 228972184 228972624 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388846
chr1 228972184 228972624 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877481
chr1 228972189 228972569 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388847
chr1 228972189 228972569 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877482
chr1 228972195 228972531 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388848
chr1 228972195 228972531 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877483
chr1 228972203 228972563 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388849
chr1 228972203 228972563 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877484
chr1 228972209 228972499 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388850
chr1 228972209 228972499 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877485
chr1 228972238 228972578 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388851
chr1 228972238 228972578 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877486
chr1 228972244 228972468 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388852
chr1 228972244 228972468 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877487
chr1 228972245 228972515 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388853
chr1 228972245 228972515 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877488
chr1 228972269 228972284 STAT2 JASPAR yes 35934020
chr1 228972271 228972292 ZNF263 JASPAR yes 35934021
chr1 228972273 228972287 TCF7L2 JASPAR yes 35934022
chr1 228972278 228972538 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388854
chr1 228972278 228972538 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877489
chr1 228972280 228972285 GATA2 JASPAR yes 35934023
chr1 228972281 228972290 SP1 TRANSFAC yes 35934024
Genes associated with rs557173559[chr1:228972281], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More