EnhancerDB
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  3. rs557232340[chr12:121368517]
Enhancers that have rs557232340[chr12:121368517]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 121361505 121369371 enh15050
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Placenta Lung (PC-9) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs557232340[chr12:121368517]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 121368506 121368519 DUXA JASPAR yes 124196567
chr12 121368507 121368518 DUX4 JASPAR yes 124196568
chr12 121368507 121368518 PHOX2A JASPAR yes 124196569
chr12 121368507 121368518 PROP1 JASPAR yes 124196570
chr12 121368510 121368520 ALX3 JASPAR yes 124196571
chr12 121368510 121368520 GSX2 JASPAR yes 124196572
chr12 121368510 121368520 MIXL1 JASPAR yes 124196573
chr12 121368510 121368520 MNX1 JASPAR yes 124196574
chr12 121368511 121368519 ISX JASPAR yes 124196575
chr12 121368511 121368519 LMX1A JASPAR yes 124196576
chr12 121368511 121368519 LMX1B JASPAR yes 124196577
chr12 121368511 121368519 NKX6-1 JASPAR yes 124196578
chr12 121368511 121368519 NKX6-2 JASPAR yes 124196579
chr12 121368511 121368519 PRRX1 JASPAR yes 124196580
chr12 121368511 121368519 RAX2 JASPAR yes 124196581
chr12 121368511 121368519 SHOX JASPAR yes 124196582
chr12 121368511 121368519 UNCX JASPAR yes 124196583
chr12 121368511 121368519 VAX1 JASPAR yes 124196584
chr12 121368516 121368522 TBP TRANSFAC yes 124196585
Genes associated with rs557232340[chr12:121368517], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More