EnhancerDB
  1. Home
  2. SNP
  3. rs55727461[chr4:8197646]
Enhancers that have rs55727461[chr4:8197646]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 8181827 8200055 enh21355
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs55727461[chr4:8197646]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 8197633 8197647 EBF1 JASPAR yes 88165656
chr4 8197634 8197647 TFAP2A JASPAR yes 88165657
chr4 8197634 8197647 TFAP2B JASPAR yes 88165658
chr4 8197634 8197647 TFAP2C JASPAR yes 88165659
chr4 8197635 8197646 EBF1 JASPAR yes 88165660
chr4 8197641 8197646 SP1 TRANSFAC yes 88165661
chr4 8197644 8197650 YY1 JASPAR yes 88165662
Genes associated with rs55727461[chr4:8197646], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More