EnhancerDB
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  3. rs55727989[chr1:212845246]
Enhancers that have rs55727989[chr1:212845246]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212836474 212847396 enh12648
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Pancreas (Panc1) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus Heart
chr1 212844659 212845312 vista5023
VISTA
Transcript factors that have rs55727989[chr1:212845246]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212845041 212845321 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107869297
chr1 212845075 212845248 FOS UCSC Txn Factor no Conserved 107869298
chr1 212845124 212845364 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869299
chr1 212845177 212845269 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107869300
chr1 212845226 212845246 RREB1 JASPAR yes 35146623
chr1 212845226 212845246 RREB1 JASPAR yes 118455013
chr1 212845230 212845250 RREB1 JASPAR yes 35146624
chr1 212845230 212845250 RREB1 JASPAR yes 118455014
chr1 212845230 212845251 ZNF263 JASPAR yes 35146625
chr1 212845230 212845251 ZNF263 JASPAR yes 118455015
chr1 212845237 212845248 GCM1 JASPAR yes 35146626
chr1 212845237 212845248 GCM1 JASPAR yes 118455016
chr1 212845238 212845248 GCM2 JASPAR yes 35146627
chr1 212845238 212845248 GCM2 JASPAR yes 118455017
chr1 212845245 212845255 ZNF740 JASPAR yes 35146628
chr1 212845245 212845255 ZNF740 JASPAR yes 118455018
Genes associated with rs55727989[chr1:212845246], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More