EnhancerDB
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  3. rs557472086[chr19:3388338]
Enhancers that have rs557472086[chr19:3388338]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3362205 3392371 enh17862
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Cervix (HeLa-S3) Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs557472086[chr19:3388338]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3386265 3389100 TCF7L2 GTRD no Colon (HCT116) 21839142
chr19 3386265 3389100 TCF7L2 GTRD no Colon (HCT116) 108366435
chr19 3387135 3388928 ZNF143 GTRD no Epithelial (MCF-7) 21839143
chr19 3387135 3388928 ZNF143 GTRD no Epithelial (MCF-7) 108366436
chr19 3387338 3388621 TCF7L2 GTRD no Colon (HCT116) 21839144
chr19 3387338 3388621 TCF7L2 GTRD no Colon (HCT116) 108366437
chr19 3387348 3388375 ZNF143 GTRD no Epithelial (MCF-7) 21839145
chr19 3387348 3388375 ZNF143 GTRD no Epithelial (MCF-7) 108366438
chr19 3387358 3388469 TCF7L2 GTRD no Colon (HCT116) 21839146
chr19 3387358 3388469 TCF7L2 GTRD no Colon (HCT116) 108366439
chr19 3387418 3388580 ZNF274 GTRD no Cervix (HeLa-S3) 21839148
chr19 3387418 3388580 ZNF274 GTRD no Cervix (HeLa-S3) 108366441
chr19 3387420 3388361 ZNF143 GTRD no Epithelial (MCF-7) 21839149
chr19 3387420 3388361 ZNF143 GTRD no Epithelial (MCF-7) 108366442
chr19 3387450 3388454 ZBTB33 GTRD no Lung (A549) 21839150
chr19 3387450 3388454 ZBTB33 GTRD no Lung (A549) 108366443
chr19 3387460 3389114 TCF7L2 GTRD no Colon (HCT116) 21839151
chr19 3387460 3389114 TCF7L2 GTRD no Colon (HCT116) 108366444
chr19 3387486 3388588 ZBTB33 GTRD no Brain (SK-N-SH) 21839152
chr19 3387486 3388588 ZBTB33 GTRD no Brain (SK-N-SH) 108366445
chr19 3387490 3388349 ZNF143 GTRD no Epithelial (MCF-7) 21839154
chr19 3387490 3388349 ZNF143 GTRD no Epithelial (MCF-7) 108366447
chr19 3387498 3389063 TCF7L2 GTRD no Colon (HCT116) 21839157
chr19 3387498 3389063 TCF7L2 GTRD no Colon (HCT116) 108366450
chr19 3387500 3388411 ZNF143 GTRD no Epithelial (MCF-7) 21839158
chr19 3387500 3388411 ZNF143 GTRD no Epithelial (MCF-7) 108366451
chr19 3387509 3388432 TCF7L2 GTRD no Colon (HCT116) 21839159
chr19 3387509 3388432 TCF7L2 GTRD no Colon (HCT116) 108366452
chr19 3387512 3388471 ZBTB33 GTRD no Brain (SK-N-SH) 21839161
chr19 3387512 3388471 ZBTB33 GTRD no Brain (SK-N-SH) 108366454
chr19 3387519 3388497 ZBTB33 GTRD no Brain (SK-N-SH) 21839163
chr19 3387519 3388497 ZBTB33 GTRD no Brain (SK-N-SH) 108366456
chr19 3387525 3388396 ZNF274 GTRD no Cervix (HeLa-S3) 21839166
chr19 3387525 3388396 ZNF274 GTRD no Cervix (HeLa-S3) 108366459
chr19 3387530 3388349 ZNF274 GTRD no Cervix (HeLa-S3) 21839168
chr19 3387530 3388349 ZNF274 GTRD no Cervix (HeLa-S3) 108366461
chr19 3387532 3388460 ZNF143 GTRD no Epithelial (MCF-7) 21839169
chr19 3387532 3388460 ZNF143 GTRD no Epithelial (MCF-7) 108366462
chr19 3387532 3388593 ZBTB33 GTRD no Brain (SK-N-SH) 21839170
chr19 3387532 3388593 ZBTB33 GTRD no Brain (SK-N-SH) 108366463
chr19 3387534 3388406 ZNF143 GTRD no Epithelial (MCF-7) 21839171
chr19 3387534 3388406 ZNF143 GTRD no Epithelial (MCF-7) 108366464
chr19 3387534 3388633 ZBTB33 GTRD no Lung (A549) 21839172
chr19 3387534 3388633 ZBTB33 GTRD no Lung (A549) 108366465
chr19 3387538 3388585 ZBTB33 GTRD no Brain (SK-N-SH) 21839173
chr19 3387538 3388585 ZBTB33 GTRD no Brain (SK-N-SH) 108366466
chr19 3387548 3388561 ZBTB33 GTRD no Lung (A549) 21839177
chr19 3387548 3388561 ZBTB33 GTRD no Lung (A549) 108366470
chr19 3387556 3388372 P63 GTRD no Skin (Keratinocyte) 21839180
chr19 3387556 3388372 P63 GTRD no Skin (Keratinocyte) 108366473
chr19 3387557 3390833 ZNF274 GTRD no Cervix (HeLa-S3) 21839181
chr19 3387557 3390833 ZNF274 GTRD no Cervix (HeLa-S3) 108366474
chr19 3387577 3388420 ZNF274 GTRD no Cervix (HeLa-S3) 21839185
chr19 3387577 3388420 ZNF274 GTRD no Cervix (HeLa-S3) 108366478
chr19 3387579 3388377 ZNF143 GTRD no Epithelial (MCF-7) 21839187
chr19 3387579 3388377 ZNF143 GTRD no Epithelial (MCF-7) 108366480
chr19 3387586 3388441 ZNF143 GTRD no Epithelial (MCF-7) 21839188
chr19 3387586 3388441 ZNF143 GTRD no Epithelial (MCF-7) 108366481
chr19 3387592 3388479 ZNF143 GTRD no Epithelial (MCF-7) 21839189
chr19 3387592 3388479 ZNF143 GTRD no Epithelial (MCF-7) 108366482
chr19 3387592 3388492 ZBTB33 GTRD no Brain (SK-N-SH) 21839190
chr19 3387592 3388492 ZBTB33 GTRD no Brain (SK-N-SH) 108366483
chr19 3387595 3388450 TCF7L2 GTRD no Colon (HCT116) 21839191
chr19 3387595 3388450 TCF7L2 GTRD no Colon (HCT116) 108366484
chr19 3387597 3388403 ZNF143 GTRD no Epithelial (MCF-7) 21839192
chr19 3387597 3388403 ZNF143 GTRD no Epithelial (MCF-7) 108366485
chr19 3387615 3388375 ZBTB33 GTRD no Brain (SK-N-SH) 21839199
chr19 3387615 3388375 ZBTB33 GTRD no Brain (SK-N-SH) 108366492
chr19 3387623 3388415 ZBTB33 GTRD no Brain (SK-N-SH) 21839203
chr19 3387623 3388415 ZBTB33 GTRD no Brain (SK-N-SH) 108366496
chr19 3387628 3388419 ZBTB33 GTRD no Brain (SK-N-SH) 21839206
chr19 3387628 3388419 ZBTB33 GTRD no Brain (SK-N-SH) 108366499
chr19 3387666 3388349 ZNF143 GTRD no Epithelial (MCF-7) 21839215
chr19 3387666 3388349 ZNF143 GTRD no Epithelial (MCF-7) 108366508
chr19 3387676 3388422 ZNF274 GTRD no Cervix (HeLa-S3) 21839218
chr19 3387676 3388422 ZNF274 GTRD no Cervix (HeLa-S3) 108366511
chr19 3387692 3388360 ZNF143 GTRD no Epithelial (MCF-7) 21839224
chr19 3387692 3388360 ZNF143 GTRD no Epithelial (MCF-7) 108366517
chr19 3387693 3388382 ZNF143 GTRD no Epithelial (MCF-7) 21839225
chr19 3387693 3388382 ZNF143 GTRD no Epithelial (MCF-7) 108366518
chr19 3387698 3388381 ZBTB33 GTRD no Lung (A549) 21839226
chr19 3387698 3388381 ZBTB33 GTRD no Lung (A549) 108366519
chr19 3387722 3388673 ZBTB33 GTRD no Lung (A549) 21839230
chr19 3387722 3388673 ZBTB33 GTRD no Lung (A549) 108366524
chr19 3387734 3388352 ZBTB33 GTRD no Lung (A549) 21839233
chr19 3387734 3388352 ZBTB33 GTRD no Lung (A549) 108366528
chr19 3387741 3388402 ZBTB33 GTRD no Brain (SK-N-SH) 21839234
chr19 3387741 3388402 ZBTB33 GTRD no Brain (SK-N-SH) 108366529
chr19 3387747 3388458 ZNF274 GTRD no Bone Marrow (K562) 21839236
chr19 3387747 3388458 ZNF274 GTRD no Bone Marrow (K562) 108366531
chr19 3387764 3388379 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21839238
chr19 3387764 3388379 E2F1 UCSC Txn Factor no Conserved 108366533
chr19 3387764 3388379 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108366534
chr19 3387782 3388442 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21839239
chr19 3387782 3388442 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108366535
chr19 3387800 3388412 ZNF274 GTRD no Bone Marrow (K562) 21839241
chr19 3387800 3388412 ZNF274 GTRD no Bone Marrow (K562) 108366537
chr19 3387825 3388670 ZNF274 GTRD no Blood (GM12878) 21839245
chr19 3387825 3388670 ZNF274 GTRD no Blood (GM12878) 108366541
chr19 3387884 3388444 ZBTB33 GTRD no Brain (SK-N-SH) 21839249
chr19 3387884 3388444 ZBTB33 GTRD no Brain (SK-N-SH) 108366545
chr19 3388018 3388783 ZNF274 GTRD no Bone Marrow (K562) 21839254
chr19 3388018 3388783 ZNF274 GTRD no Bone Marrow (K562) 108366550
chr19 3388032 3388610 ZNF274 GTRD no Liver (HepG2) 21839255
chr19 3388032 3388610 ZNF274 GTRD no Liver (HepG2) 108366551
chr19 3388099 3389424 ZNF274 GTRD no Bone Marrow (K562) 21839256
chr19 3388099 3389424 ZNF274 GTRD no Bone Marrow (K562) 108366552
chr19 3388101 3388576 ZNF274 GTRD no Liver (HepG2) 21839257
chr19 3388101 3388576 ZNF274 GTRD no Liver (HepG2) 108366553
Genes associated with rs557472086[chr19:3388338], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More