EnhancerDB
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  3. rs55748916[chr1:28681234]
Enhancers that have rs55748916[chr1:28681234]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28664885 28683047 enh11681
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Placenta Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Stomach
Transcript factors that have rs55748916[chr1:28681234]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28681217 28681235 SRF JASPAR yes 27762470
chr1 28681226 28681246 RREB1 JASPAR yes 27762471
chr1 28681228 28681248 RREB1 JASPAR yes 27762472
chr1 28681230 28681250 RREB1 JASPAR yes 27762473
chr1 28681232 28681252 RREB1 JASPAR yes 27762474
chr1 28681234 28681254 RREB1 JASPAR yes 27762475
Genes associated with rs55748916[chr1:28681234], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More