EnhancerDB
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  3. rs557494739[chr1:222018844]
Enhancers that have rs557494739[chr1:222018844]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221995465 222021667 enh12697
Liver Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs557494739[chr1:222018844]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222018831 222018847 SOX4 JASPAR yes 35574887
chr1 222018832 222018845 DUXA JASPAR yes 35574888
chr1 222018844 222018850 LEF1 TRANSFAC yes 35574889
chr1 222018844 222018850 SOX10 JASPAR yes 35574890
Genes associated with rs557494739[chr1:222018844], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More