EnhancerDB
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  3. rs557522746[chr16:29312196]
Enhancers that have rs557522746[chr16:29312196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29294585 29314235 enh16624
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs557522746[chr16:29312196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29311364 29312751 ZNF143 GTRD no Epithelial (MCF-7) 21702346
chr16 29311364 29312751 ZNF143 GTRD no Epithelial (MCF-7) 108191480
chr16 29311380 29312262 ZNF143 GTRD no Epithelial (MCF-7) 21702347
chr16 29311380 29312262 ZNF143 GTRD no Epithelial (MCF-7) 108191481
chr16 29311401 29312818 ZNF143 GTRD no Epithelial (MCF-7) 21702348
chr16 29311401 29312818 ZNF143 GTRD no Epithelial (MCF-7) 108191482
chr16 29311839 29312298 ZNF143 GTRD no Epithelial (MCF-7) 21702352
chr16 29312182 29312200 ESR1 JASPAR yes 10259401
chr16 29312190 29312200 SP1 JASPAR yes 10259403
chr16 29312192 29312202 ZNF740 JASPAR yes 10259404
Genes associated with rs557522746[chr16:29312196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More