EnhancerDB
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  3. rs557540869[chr2:238356258]
Enhancers that have rs557540869[chr2:238356258]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238336205 238371002 enh19393
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557540869[chr2:238356258]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238356251 238356263 NHLH1 JASPAR yes 82110524
chr2 238356254 238356263 ZEB1 JASPAR yes 82110525
chr2 238356256 238356261 SP1 TRANSFAC yes 82110526
Genes associated with rs557540869[chr2:238356258], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More