EnhancerDB
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  3. rs55754126[chr16:29299928]
Enhancers that have rs55754126[chr16:29299928]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29294585 29314235 enh16624
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs55754126[chr16:29299928]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29299515 29300924 TEF1 GTRD no Bone (Osteoblast) 21702150
chr16 29299626 29300770 ZNF274 GTRD no Liver (HepG2) 21702151
chr16 29299792 29300633 ZNF274 GTRD no Liver (HepG2) 21702152
chr16 29299812 29300455 ZBTB33 GTRD no Lung (A549) 21702153
chr16 29299814 29300815 ZNF274 GTRD no Liver (HepG2) 21702154
chr16 29299825 29300558 ZNF274 GTRD no Bone Marrow (K562) 21702155
chr16 29299843 29300613 ZNF274 GTRD no Liver (HepG2) 21702156
chr16 29299845 29300487 ZNF274 GTRD no Bone Marrow (K562) 21702157
chr16 29299922 29299941 CTCF JASPAR yes 10257831
chr16 29299925 29299940 ZIC3 JASPAR yes 10257832
chr16 29299925 29299940 ZIC4 JASPAR yes 10257833
chr16 29299926 29299936 FIGLA JASPAR yes 10257834
chr16 29299926 29299936 TCF3 JASPAR yes 10257835
chr16 29299927 29299941 GLIS2 JASPAR yes 10257836
chr16 29299927 29299941 GLIS3 JASPAR yes 10257837
chr16 29299928 29299933 USF2 TRANSFAC yes 10257838
Genes associated with rs55754126[chr16:29299928], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More