EnhancerDB
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  3. rs557553667[chr19:10352726]
Enhancers that have rs557553667[chr19:10352726]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10331225 10355975 enh5000
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Blood (T-cell) Heart
chr19 10352370 10352740 vista28571
VISTA
Transcript factors that have rs557553667[chr19:10352726]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10352200 10354827 TCF7L2 GTRD no Colon (HCT116) 21848622
chr19 10352200 10354827 TCF7L2 GTRD no Colon (HCT116) 108383131
chr19 10352268 10353272 TCF7L2 GTRD no Colon (HCT116) 21848624
chr19 10352268 10353272 TCF7L2 GTRD no Colon (HCT116) 108383133
chr19 10352289 10354784 TCF7L2 GTRD no Colon (HCT116) 21848625
chr19 10352289 10354784 TCF7L2 GTRD no Colon (HCT116) 108383134
chr19 10352291 10354422 ZNF143 GTRD no Epithelial (MCF-7) 21848626
chr19 10352291 10354422 ZNF143 GTRD no Epithelial (MCF-7) 108383135
chr19 10352291 10354706 TCF7L2 GTRD no Colon (HCT116) 21848627
chr19 10352291 10354706 TCF7L2 GTRD no Colon (HCT116) 108383136
chr19 10352319 10354620 TCF7L2 GTRD no Colon (HCT116) 21848628
chr19 10352319 10354620 TCF7L2 GTRD no Colon (HCT116) 108383137
chr19 10352323 10354398 ZNF143 GTRD no Epithelial (MCF-7) 21848629
chr19 10352323 10354398 ZNF143 GTRD no Epithelial (MCF-7) 108383138
chr19 10352326 10354808 TCF7L2 GTRD no Colon (HCT116) 21848630
chr19 10352326 10354808 TCF7L2 GTRD no Colon (HCT116) 108383139
chr19 10352363 10354571 TCF7L2 GTRD no Colon (HCT116) 21848631
chr19 10352363 10354571 TCF7L2 GTRD no Colon (HCT116) 108383140
chr19 10352437 10354360 ZNF274 GTRD no Blood (GM12878) 21848632
chr19 10352437 10354360 ZNF274 GTRD no Blood (GM12878) 108383141
chr19 10352518 10353508 ZNF143 GTRD no Epithelial (MCF-7) 21848633
chr19 10352518 10353508 ZNF143 GTRD no Epithelial (MCF-7) 108383142
chr19 10352524 10353005 ZNF274 GTRD no Bone Marrow (K562) 108383143
chr19 10352572 10352872 ZNF274 GTRD no Bone Marrow (K562) 108383144
chr19 10352625 10352969 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108383145
chr19 10352635 10353665 ZNF143 GTRD no Epithelial (MCF-7) 21848634
chr19 10352635 10353665 ZNF143 GTRD no Epithelial (MCF-7) 108383146
chr19 10352725 10352731 TBP TRANSFAC yes 70801526
chr19 10352725 10352731 TBP TRANSFAC yes 112416400
Genes associated with rs557553667[chr19:10352726], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More