EnhancerDB
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  3. rs557617377[chr1:201537853]
Enhancers that have rs557617377[chr1:201537853]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201518985 201542475 enh27421
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Heart
Transcript factors that have rs557617377[chr1:201537853]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201536966 201538031 ZNF274 GTRD no Bone Marrow (K562) 21364777
chr1 201537319 201541087 ZNF143 GTRD no Epithelial (MCF-7) 107856678
chr1 201537506 201540703 ZNF143 GTRD no Epithelial (MCF-7) 107856679
chr1 201537579 201537985 ZNF274 GTRD no Bone Marrow (K562) 21364778
chr1 201537766 201540685 ZNF143 GTRD no Epithelial (MCF-7) 107856680
chr1 201537788 201539147 ZNF274 GTRD no Bone Marrow (K562) 21364779
chr1 201537788 201540717 ZNF274 GTRD no Bone Marrow (K562) 21364780
chr1 201537788 201540717 ZNF274 GTRD no Bone Marrow (K562) 107856681
chr1 201537838 201537853 FOXA1 JASPAR yes 34508034
chr1 201537844 201537853 SOX9 JASPAR yes 34508044
chr1 201537850 201537865 FOXA1 JASPAR yes 34508045
Genes associated with rs557617377[chr1:201537853], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More