EnhancerDB
  1. Home
  2. SNP
  3. rs557640455[chr1:41960193]
Enhancers that have rs557640455[chr1:41960193]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41956025 41971975 enh11789
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
Transcript factors that have rs557640455[chr1:41960193]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41960188 41960197 HIC2 JASPAR yes 28395199
chr1 41960189 41960203 TLX1 JASPAR yes 28395200
chr1 41960190 41960202 HES5 JASPAR yes 28395201
chr1 41960190 41960202 HES7 JASPAR yes 28395202
chr1 41960191 41960201 BHLHE40 JASPAR yes 28395203
chr1 41960191 41960201 HEY1 JASPAR yes 28395204
chr1 41960191 41960201 HEY2 JASPAR yes 28395205
chr1 41960191 41960201 MAX JASPAR yes 28395206
chr1 41960191 41960201 MNT JASPAR yes 28395207
chr1 41960191 41960201 TFE3 JASPAR yes 28395208
chr1 41960191 41960201 TFEB JASPAR yes 28395209
chr1 41960192 41960199 USF1 JASPAR yes 28395210
chr1 41960193 41960198 MYC TRANSFAC yes 28395211
chr1 41960193 41960198 USF1 TRANSFAC yes 28395212
chr1 41960193 41960198 USF2 TRANSFAC yes 28395213
Genes associated with rs557640455[chr1:41960193], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More