EnhancerDB
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  3. rs557691567[chr17:53520554]
Enhancers that have rs557691567[chr17:53520554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs557691567[chr17:53520554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53520089 53520713 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772621
chr17 53520365 53520645 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772622
chr17 53520545 53520559 PAX6 JASPAR yes 54851380
chr17 53520554 53520566 HNF1B JASPAR yes 54851381
chr17 53520554 53520567 HNF1B JASPAR yes 54851382
Genes associated with rs557691567[chr17:53520554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More