EnhancerDB
  1. Home
  2. SNP
  3. rs557725350[chr2:236420660]
Enhancers that have rs557725350[chr2:236420660]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs557725350[chr2:236420660]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236420658 236420668 TBX21 JASPAR yes 81976357
chr2 236420658 236420669 TBX20 JASPAR yes 81976358
Genes associated with rs557725350[chr2:236420660], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More