EnhancerDB
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  3. rs557768616[chr1:28577173]
Enhancers that have rs557768616[chr1:28577173]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28563689 28580455 enh185
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs557768616[chr1:28577173]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28577168 28577183 MEF2C JASPAR yes 27754174
chr1 28577170 28577185 FOXP1 JASPAR yes 27754175
chr1 28577171 28577186 FOXP1 JASPAR yes 27754176
chr1 28577172 28577178 TBP TRANSFAC yes 27754177
chr1 28577172 28577187 FOXP1 JASPAR yes 27754178
chr1 28577172 28577193 IRF1 JASPAR yes 27754179
chr1 28577173 28577188 FOXP1 JASPAR yes 27754180
chr1 28577173 28577194 IRF1 JASPAR yes 27754181
Genes associated with rs557768616[chr1:28577173], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More