EnhancerDB
  1. Home
  2. SNP
  3. rs557847520[chr1:90423883]
Enhancers that have rs557847520[chr1:90423883]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90404665 90425035 enh485
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs557847520[chr1:90423883]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90423862 90423883 IRF1 JASPAR yes 30638891
chr1 90423867 90423888 IRF1 JASPAR yes 30638896
chr1 90423869 90423889 RREB1 JASPAR yes 30638897
chr1 90423872 90423884 IRF1 JASPAR yes 30638898
chr1 90423872 90423887 FOXP1 JASPAR yes 30638899
chr1 90423873 90423894 IRF1 JASPAR yes 30638900
chr1 90423874 90423894 RREB1 JASPAR yes 30638901
chr1 90423879 90423899 RREB1 JASPAR yes 30638902
chr1 90423880 90423895 FOXP1 JASPAR yes 30638903
chr1 90423881 90423902 IRF1 JASPAR yes 30638904
chr1 90423883 90423894 FOXP2 JASPAR yes 30638905
Genes associated with rs557847520[chr1:90423883], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More