EnhancerDB
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  3. rs557921403[chr12:123547879]
Enhancers that have rs557921403[chr12:123547879]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123537905 123558786 enh15079
Brain (SK-N-MC) Liver Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Heart
chr12 123546924 123551725 vista361
VISTA
Transcript factors that have rs557921403[chr12:123547879]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123547864 123547879 TFAP2A JASPAR yes 124314782
chr12 123547864 123547879 TFAP2C JASPAR yes 124314783
chr12 123547872 123547881 SNAI2 JASPAR yes 124314786
chr12 123547872 123547883 USF2 JASPAR yes 124314787
Genes associated with rs557921403[chr12:123547879], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More