EnhancerDB
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  3. rs557945580[chr1:40267100]
Enhancers that have rs557945580[chr1:40267100]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40262423 40268473 enh11765
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas Thymus Stomach
Transcript factors that have rs557945580[chr1:40267100]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40267092 40267109 ESR1 JASPAR yes 28291834
chr1 40267096 40267105 RUNX2 JASPAR yes 28291835
Genes associated with rs557945580[chr1:40267100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More