EnhancerDB
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  3. rs557970809[chr6:110856729]
Enhancers that have rs557970809[chr6:110856729]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs557970809[chr6:110856729]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110856709 110856730 IRF1 JASPAR yes 104295173
chr6 110856715 110856736 IRF1 JASPAR yes 104295176
Genes associated with rs557970809[chr6:110856729], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More