EnhancerDB
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  3. rs55797450[chr12:52219955]
Enhancers that have rs55797450[chr12:52219955]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52218612 52224015 enh29576
Brain (SK-N-SH) Epithelial (MCF-7) Astrocyte Breast Neural Stem Cells (H9) Stomach
Transcript factors that have rs55797450[chr12:52219955]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52215212 52219971 ZNF143 GTRD no Epithelial (MCF-7) 21545750
chr12 52218701 52220073 ZNF143 GTRD no Epithelial (MCF-7) 21545753
chr12 52219950 52219957 SP1 TRANSFAC yes 120902087
chr12 52219950 52219960 SP1 JASPAR yes 120902088
chr12 52219950 52219960 SP1 TRANSFAC yes 120902089
chr12 52219951 52219958 SP1 TRANSFAC yes 120902090
chr12 52219952 52219957 SP1 TRANSFAC yes 120902091
chr12 52219952 52219958 SP1 TRANSFAC yes 120902092
chr12 52219952 52219959 SP1 TRANSFAC yes 120902093
chr12 52219954 52219964 ZNF740 JASPAR yes 120902094
chr12 52219955 52219965 SP1 JASPAR yes 120902095
chr12 52219955 52219965 ZNF740 JASPAR yes 120902096
chr12 52219955 52219969 GLIS2 JASPAR yes 120902097
chr12 52219955 52219969 GLIS3 JASPAR yes 120902098
Genes associated with rs55797450[chr12:52219955], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More