EnhancerDB
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  3. rs55798378[chr1:23079572]
Enhancers that have rs55798378[chr1:23079572]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23070013 23090842 enh119
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Lung Stomach Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs55798378[chr1:23079572]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23079562 23079572 FIGLA JASPAR yes 27388647
chr1 23079562 23079572 ID4 JASPAR yes 27388648
chr1 23079562 23079572 TCF3 JASPAR yes 27388649
chr1 23079562 23079572 TCF4 JASPAR yes 27388650
Genes associated with rs55798378[chr1:23079572], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More