EnhancerDB
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  3. rs558060690[chr1:235435126]
Enhancers that have rs558060690[chr1:235435126]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235432005 235446995 enh999
Large Intestine Blood (T-cell) Astrocyte Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs558060690[chr1:235435126]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235435115 235435136 REST JASPAR yes 36358380
chr1 235435116 235435135 REST JASPAR yes 36358381
chr1 235435126 235435139 SMAD2 JASPAR yes 36358382
Genes associated with rs558060690[chr1:235435126], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More