EnhancerDB
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  3. rs55806959[chr12:104978039]
Enhancers that have rs55806959[chr12:104978039]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 104958166 105005515 enh2574
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Heart
Transcript factors that have rs55806959[chr12:104978039]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 104978020 104978041 IRF1 JASPAR yes 123394369
chr12 104978021 104978042 ZNF263 JASPAR yes 123394370
chr12 104978024 104978039 IRF9 JASPAR yes 123394377
chr12 104978026 104978047 IRF1 JASPAR yes 123394378
chr12 104978027 104978042 LEF1 JASPAR yes 123394379
chr12 104978028 104978042 TCF7L2 JASPAR yes 123394380
chr12 104978030 104978051 IRF1 JASPAR yes 123394381
chr12 104978033 104978047 SPI1 JASPAR yes 123394382
chr12 104978033 104978054 IRF1 JASPAR yes 123394383
chr12 104978034 104978055 IRF1 JASPAR yes 123394384
chr12 104978036 104978051 FOXP1 JASPAR yes 123394385
chr12 104978038 104978053 FOXP1 JASPAR yes 123394386
chr12 104978039 104978054 FOXP1 JASPAR yes 123394387
Genes associated with rs55806959[chr12:104978039], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More