EnhancerDB
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  3. rs558083623[chr16:88279293]
Enhancers that have rs558083623[chr16:88279293]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs558083623[chr16:88279293]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88278356 88283448 ZNF143 GTRD no Epithelial (MCF-7) 21735620
chr16 88278561 88281077 ZNF143 GTRD no Epithelial (MCF-7) 21735621
chr16 88278771 88279321 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735622
chr16 88278849 88279379 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735623
chr16 88278977 88279493 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735625
chr16 88279021 88279341 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735626
chr16 88279037 88279327 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735627
chr16 88279052 88279312 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21735628
chr16 88279052 88279316 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21735629
chr16 88279178 88279554 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21735631
chr16 88279251 88279511 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21735632
chr16 88279255 88279771 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735633
chr16 88279256 88279912 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21735634
chr16 88279278 88279808 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735635
chr16 88279291 88279302 NFE2 JASPAR yes 12270580
chr16 88279292 88279301 JDP2 JASPAR yes 12270581
Genes associated with rs558083623[chr16:88279293], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More