EnhancerDB
  1. Home
  2. SNP
  3. rs55808400[chr16:1209454]
Enhancers that have rs55808400[chr16:1209454]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1204345 1228235 enh31663
Brain (SK-N-MC) Ovary Astrocyte Lung (A549) Stomach Muscle (A673) Colon (HCT116) Thyroid Pancreas Uterus Heart
Transcript factors that have rs55808400[chr16:1209454]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1207855 1210033 TCF7L2 GTRD no Colon (HCT116) 21684318
chr16 1207855 1210033 TCF7L2 GTRD no Colon (HCT116) 108171256
chr16 1208410 1209605 ZNF143 GTRD no Epithelial (MCF-7) 108171257
chr16 1208657 1209795 TCF7L2 GTRD no Colon (HCT116) 21684319
chr16 1208657 1209795 TCF7L2 GTRD no Colon (HCT116) 108171258
chr16 1208903 1209527 TCF7L2 GTRD no Colon (HCT116) 21684320
chr16 1208903 1209527 TCF7L2 GTRD no Colon (HCT116) 108171259
chr16 1208933 1209742 TCF7L2 GTRD no Colon (HCT116) 21684321
chr16 1208933 1209742 TCF7L2 GTRD no Colon (HCT116) 108171260
chr16 1208972 1210011 ZNF143 GTRD no Epithelial (MCF-7) 108171261
chr16 1209002 1209512 ZNF274 GTRD no Bone Marrow (K562) 108171262
chr16 1209069 1209719 TCF7L2 GTRD no Colon (HCT116) 21684322
chr16 1209069 1209719 TCF7L2 GTRD no Colon (HCT116) 108171263
chr16 1209438 1209455 ESR1 JASPAR yes 9139623
chr16 1209439 1209459 ESR1 JASPAR yes 9139625
chr16 1209439 1209460 ZNF263 JASPAR yes 9139626
Genes associated with rs55808400[chr16:1209454], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More