EnhancerDB
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  3. rs558139772[chr3:188669084]
Enhancers that have rs558139772[chr3:188669084]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 188663255 188677255 enh21197
Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Heart
chr3 188668723 188669229 vista43593
VISTA
Transcript factors that have rs558139772[chr3:188669084]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 188668630 188669155 GATA2 UCSC Txn Factor no Conserved 108531406
chr3 188669079 188669091 YY1 JASPAR yes 8532135
chr3 188669079 188669091 YY1 JASPAR yes 71105957
chr3 188669084 188669088 YY1 TRANSFAC yes 8532136
chr3 188669084 188669088 YY1 TRANSFAC yes 71105958
Genes associated with rs558139772[chr3:188669084], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More