EnhancerDB
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  3. rs558146489[chr18:56661823]
Enhancers that have rs558146489[chr18:56661823]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56653868 56668695 enh4877
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Stomach Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Uterus Heart
Transcript factors that have rs558146489[chr18:56661823]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56661221 56662680 AR GTRD no Prostate (PC-3) 21824477
chr18 56661812 56661833 IRF1 JASPAR yes 110998359
chr18 56661814 56661829 STAT2 JASPAR yes 110998360
chr18 56661816 56661828 IRF1 JASPAR yes 110998361
chr18 56661819 56661831 FOXC2 JASPAR yes 110998362
chr18 56661821 56661825 YY1 TRANSFAC yes 110998363
Genes associated with rs558146489[chr18:56661823], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More