EnhancerDB
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  3. rs558227885[chr1:154809580]
Enhancers that have rs558227885[chr1:154809580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs558227885[chr1:154809580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154809578 154809593 FOXP1 JASPAR yes 32316755
chr1 154809579 154809594 FOXP1 JASPAR yes 32316756
chr1 154809580 154809595 FOXP1 JASPAR yes 32316757
Genes associated with rs558227885[chr1:154809580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More