EnhancerDB
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  3. rs55822955[chr17:45961813]
Enhancers that have rs55822955[chr17:45961813]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 45938065 45965315 enh17194
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs55822955[chr17:45961813]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 45961269 45961865 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21767202
chr17 45961349 45961845 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21767203
chr17 45961514 45961984 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21767205
chr17 45961748 45962792 TCF7L2 GTRD no Colon (HCT116) 21767207
chr17 45961806 45961827 ZNF263 JASPAR yes 54546034
chr17 45961809 45961830 ZNF263 JASPAR yes 54546035
chr17 45961810 45961821 FLI1 JASPAR yes 54546036
chr17 45961811 45961821 ETV6 JASPAR yes 54546037
chr17 45961811 45961824 ELF1 JASPAR yes 54546038
chr17 45961812 45961819 SPI1 JASPAR yes 54546039
chr17 45961812 45961820 EHF JASPAR yes 54546040
Genes associated with rs55822955[chr17:45961813], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 46018872 46025654 + PNPO ENSG00000108439.5 46018872 57059 Spleen 0.213205 15982