EnhancerDB
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  3. rs558239421[chr16:376057]
Enhancers that have rs558239421[chr16:376057]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs558239421[chr16:376057]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 375960 380365 ZNF143 GTRD no Epithelial (MCF-7) 21683846
chr16 375960 380365 ZNF143 GTRD no Epithelial (MCF-7) 108170225
chr16 376036 377701 ZNF143 GTRD no Epithelial (MCF-7) 21683847
chr16 376036 377701 ZNF143 GTRD no Epithelial (MCF-7) 108170226
chr16 376053 376068 MEF2A JASPAR yes 9104760
chr16 376055 376067 MEF2A JASPAR yes 9104761
chr16 376055 376067 MEF2B JASPAR yes 9104762
chr16 376055 376067 MEF2D JASPAR yes 9104763
chr16 376056 376066 MEF2A JASPAR yes 9104764
chr16 376057 376065 FOXL1 JASPAR yes 9104765
chr16 376057 376069 MEF2A JASPAR yes 9104766
Genes associated with rs558239421[chr16:376057], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More