EnhancerDB
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  3. rs558257824[chr16:1339480]
Enhancers that have rs558257824[chr16:1339480]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr16 1339188 1339523 vista21544
VISTA
Transcript factors that have rs558257824[chr16:1339480]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1337318 1340439 ZNF143 GTRD no Epithelial (MCF-7) 21684538
chr16 1337318 1340439 ZNF143 GTRD no Epithelial (MCF-7) 108171312
chr16 1337361 1339591 TCF7L2 GTRD no Colon (HCT116) 21684541
chr16 1337361 1339591 TCF7L2 GTRD no Colon (HCT116) 108171313
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 21684544
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171314
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171315
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171316
chr16 1337804 1339504 TCF7L2 GTRD no Colon (HCT116) 21684554
chr16 1337804 1339504 TCF7L2 GTRD no Colon (HCT116) 108171318
chr16 1338878 1339729 TCF7L2 GTRD no Colon (HCT116) 21684576
chr16 1338878 1339729 TCF7L2 GTRD no Colon (HCT116) 108171324
chr16 1339333 1339926 ZNF143 GTRD no Epithelial (MCF-7) 21684579
chr16 1339333 1339926 ZNF143 GTRD no Epithelial (MCF-7) 108171329
chr16 1339418 1339625 ZNF274 GTRD no Blood (GM12878) 108171330
chr16 1339459 1339480 ZNF263 JASPAR yes 9148465
chr16 1339459 1339480 ZNF263 JASPAR yes 49326494
chr16 1339462 1339483 ZNF263 JASPAR yes 9148468
chr16 1339462 1339483 ZNF263 JASPAR yes 49326497
chr16 1339463 1339484 ZNF263 JASPAR yes 9148470
chr16 1339463 1339484 ZNF263 JASPAR yes 49326499
chr16 1339466 1339487 ZNF263 JASPAR yes 9148473
chr16 1339466 1339487 ZNF263 JASPAR yes 49326502
chr16 1339467 1339488 ZNF263 JASPAR yes 9148475
chr16 1339467 1339488 ZNF263 JASPAR yes 49326504
chr16 1339469 1339480 E2F6 JASPAR yes 9148477
chr16 1339469 1339480 E2F6 JASPAR yes 49326506
chr16 1339473 1339484 E2F6 JASPAR yes 9148480
chr16 1339473 1339484 E2F6 JASPAR yes 49326509
chr16 1339475 1339483 SP1 TRANSFAC yes 9148481
chr16 1339475 1339483 SP1 TRANSFAC yes 49326510
chr16 1339477 1339483 MAZ TRANSFAC yes 9148482
chr16 1339477 1339483 MAZ TRANSFAC yes 49326511
Genes associated with rs558257824[chr16:1339480], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More