EnhancerDB
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  3. rs55827218[chr1:212923536]
Enhancers that have rs55827218[chr1:212923536]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212921265 212930417 enh914
Liver (HepG2) Brain (SK-N-SH) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs55827218[chr1:212923536]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212923180 212923784 CTCF UCSC Txn Factor no Conserved 107869343
chr1 212923216 212923900 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21379192
chr1 212923216 212923900 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869344
chr1 212923228 212923748 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21379193
chr1 212923228 212923748 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869345
chr1 212923359 212923949 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21379194
chr1 212923359 212923949 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869346
chr1 212923437 212924033 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21379195
chr1 212923437 212924033 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869347
chr1 212923454 212923974 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21379196
chr1 212923454 212923974 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869348
chr1 212923531 212923546 RFX5 JASPAR yes 35150389
chr1 212923535 212923971 RELA UCSC Txn Factor no Conserved 107869349
chr1 212923536 212923549 TFAP2A JASPAR yes 35150390
chr1 212923536 212923549 TFAP2B JASPAR yes 35150391
Genes associated with rs55827218[chr1:212923536], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More