EnhancerDB
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  3. rs558277020[chr1:93415053]
Enhancers that have rs558277020[chr1:93415053]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 93406845 93426055 enh12052
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs558277020[chr1:93415053]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 93414415 93415205 ZNF274 GTRD no Blood (GM12878) 107814567
chr1 93414572 93415401 ZNF274 GTRD no Bone Marrow (K562) 107814568
chr1 93414682 93415108 ZNF274 GTRD no Blood (GM12878) 107814569
chr1 93414703 93415238 ZNF274 GTRD no Bone Marrow (K562) 107814570
chr1 93414756 93415203 ZNF274 GTRD no Bone Marrow (K562) 107814571
chr1 93414780 93415408 ZNF274 GTRD no Bone Marrow (K562) 107814572
chr1 93415049 93415067 RARA JASPAR yes 30779151
Genes associated with rs558277020[chr1:93415053], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More