EnhancerDB
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  3. rs558284667[chr2:28578855]
Enhancers that have rs558284667[chr2:28578855]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28576025 28608635 enh18385
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs558284667[chr2:28578855]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28578303 28579777 POLR2A UCSC Txn Factor no Conserved 108431598
chr2 28578845 28578855 HOXC10 JASPAR yes 72641203
chr2 28578845 28578856 HOXC11 JASPAR yes 72641204
chr2 28578846 28578856 EMX1 JASPAR yes 72641205
chr2 28578846 28578856 MEOX2 JASPAR yes 72641206
chr2 28578847 28578855 NKX6-1 JASPAR yes 72641207
chr2 28578851 28578861 RUNX3 JASPAR yes 72641208
chr2 28578854 28578869 ZIC3 JASPAR yes 72641209
chr2 28578854 28578869 ZIC4 JASPAR yes 72641210
chr2 28578855 28578869 ZIC1 JASPAR yes 72641211
Genes associated with rs558284667[chr2:28578855], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More