EnhancerDB
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  3. rs558297152[chr1:202002870]
Enhancers that have rs558297152[chr1:202002870]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs558297152[chr1:202002870]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202002348 202002955 ZNF143 GTRD no Epithelial (MCF-7) 21365492
chr1 202002398 202003087 ZNF274 GTRD no Cervix (HeLa-S3) 21365493
chr1 202002864 202002872 EHF JASPAR yes 34543973
chr1 202002869 202002873 NFE TRANSFAC yes 34543974
chr1 202002869 202002874 GATA1 TRANSFAC yes 34543975
chr1 202002869 202002875 GATA3 JASPAR yes 34543976
Genes associated with rs558297152[chr1:202002870], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More