EnhancerDB
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  3. rs558315474[chr1:28777129]
Enhancers that have rs558315474[chr1:28777129]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28772305 28780210 enh26592
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Stomach
Transcript factors that have rs558315474[chr1:28777129]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28777108 28777129 IRF1 JASPAR yes 27772550
chr1 28777108 28777129 IRF1 JASPAR yes 118262968
chr1 28777111 28777131 RREB1 JASPAR yes 27772552
chr1 28777111 28777131 RREB1 JASPAR yes 118262970
chr1 28777112 28777132 RREB1 JASPAR yes 27772554
chr1 28777112 28777132 RREB1 JASPAR yes 118262972
chr1 28777114 28777129 FOXP1 JASPAR yes 27772556
chr1 28777114 28777129 FOXP1 JASPAR yes 118262974
chr1 28777115 28777135 RREB1 JASPAR yes 27772559
chr1 28777115 28777135 RREB1 JASPAR yes 118262977
chr1 28777116 28777136 RREB1 JASPAR yes 27772560
chr1 28777116 28777136 RREB1 JASPAR yes 118262978
chr1 28777117 28777132 MEF2C JASPAR yes 27772561
chr1 28777117 28777132 MEF2C JASPAR yes 118262979
chr1 28777118 28777133 RUNX2 JASPAR yes 27772562
chr1 28777118 28777133 RUNX2 JASPAR yes 118262980
chr1 28777119 28777139 RREB1 JASPAR yes 27772563
chr1 28777119 28777139 RREB1 JASPAR yes 118262981
chr1 28777120 28777140 RREB1 JASPAR yes 27772564
chr1 28777120 28777140 RREB1 JASPAR yes 118262982
chr1 28777123 28777143 RREB1 JASPAR yes 27772565
chr1 28777123 28777143 RREB1 JASPAR yes 118262983
chr1 28777124 28777144 RREB1 JASPAR yes 27772566
chr1 28777124 28777144 RREB1 JASPAR yes 118262984
chr1 28777127 28777139 FOXI1 JASPAR yes 27772567
chr1 28777127 28777139 FOXI1 JASPAR yes 118262985
chr1 28777127 28777147 RREB1 JASPAR yes 27772568
chr1 28777127 28777147 RREB1 JASPAR yes 118262986
chr1 28777128 28777148 RREB1 JASPAR yes 27772569
Genes associated with rs558315474[chr1:28777129], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More